
ISOLATION AND MOLECULAR CHARACTERIZATION OF PHOSPHATE SOLUBILIZING BACTERIA FROM RHIZOSPHERIC SOILS OF TROPICAL LOWLAND RICE
Asian Journal of Microbiology and Biotechnology,
Page 7-25
DOI:
10.56557/ajmab/2022/v7i27920
Abstract
Phosphate-solubilizing bacteria (PSB) can promote the dissolution of insoluble phosphorus in soil, enhancing the availability of soluble P and reducing the consumption of fertilizer and aid in sustainable agricultural development. The phosphate solubilising bacteria were isolated from the rhizospheric soils of the experimental site located in the ICAR-National Rice Research Institute's experimental farm in Cuttack, India. & the population of PSBs varied between 1-22.5 cfu/gm*104 and higher in DSR (Direct seeded rice) compared to TPR (Transplanted rice). Phosphate solubilization efficiency (PSE) of the isolates gave better result in Pikovskaya’s agar medium plates i.e. 188.9% in K6 (Kasalath, P80, DSR) rather than National Botanical Research Institute’s Phosphate growth medium (NBRIP) i.e. 73.3% for K6. The highest PSE% in C sources was found in lactose i.e. 166.7% for the isolate K9 (Kasalath, P0, DSR) and 180.0% for the isolate D17 (Dular, P80, TPR) for potassium nitrate as N source. The morphological study by staining characteristics showed that all the isolates were gram negative and cocci except D19 (Dular, P80, TPR) which was gram positive and rod shaped. Amplified fragments of oligonucleotide primers in RAPD characterization showed 51.81% polymorphism and 44.54% monomorphism. Based on dendrogram all the isolates were placed in group A except S11 (Dular, P80, TPR) which was placed in major group B showing great variation from all other isolates and group A consists of 6 minor groups in which minor group A6 was the largest containing 5 isolates i.e. Kasalath, P40, DSR (S13), Kasalath, P80, DSR (S14, S15, S16) & IR36, P40, DSR (S17).
Keywords:
- P cycle
- phosphate solubilizing bacteria
- phosphate solubilization efficiency
- RAPD
How to Cite
References
Glick BR, Penrose DM, Li J. A model for the lowering of plant ethylene concentrations by plant growth-promoting bacteria. Journal of Theoretical Biology. 1998;190(1):63-68.
Dey KB. Phosphate solubilizing organisms in improving fertility status. In Biofertilizers: Potentialities and Problems. Calcutta: Plant Physiology Forum, NayaProkash. 1988;237- 48.
Richardson AE. Prospects for using soil microorganisms to improve the acquisition of phosphorus by plants. Functional Plant Biology. 2001;28(9):897-906.
Goldstein AH. Bacterial solubilization of mineral phosphates: historical perspective and future prospects. American Journal of Alternative Agriculture. 1986;1(2):51-57.
Jones DA, Smith BFL, Wilson MJ, Goodman BA. Solubilizator fungi of phosphate in rise soil. Mycol Res. 1991;95:1090-3.
Katznelson H, Peterson EA, Rouatt JW. Phosphate-dissolving microorganisms on seed and in the root zone of plants. Canadian Journal of Botany. 1962;40(9):1181-1186.
Raghu K, MacRae IC. Occurrence of phosphate‐dissolving micro‐organisms in the rhizosphere of rice plants and in submerged soils. Journal of Applied Bacteriology. 1966;29(3):582-586.
Alexander M. Introduction to soil microbiology John Wiley & Sons. Inc. New York, USA. 1977;115-147.
Illmer P, Schinner F. Solubilization of inorganic calcium phosphates—solubilization mechanisms. Soil Biology and Biochemistry. 1995;27(3):257-263.
Richardson AE. Prospects for using soil microorganisms to improve the acquisition of phosphorus by plants. Functional Plant Biology. 2001;28(9):897-906.
Fankem H, Nwaga D, Deubel A, Dieng L, Merbach W, Etoa FX . Occurrence and functioning of phosphate solubilizing microorganisms from oil palm tree (Elaeisguineensis) rhizosphere in Cameroon. African Journal of Biotechnology. 2006;5(24).
Saikia R, Srivastava AK, Singh K, Arora DK, Lee MW. Effect of iron availability on induction of systemic resistance to Fusarium wilt of Chickpea by Pseudomonas spp. Mycobiology. 2005;33(1):35-40.
Louw HA, Webley DM. A study of soil bacteria dissolving certain mineral phosphate fertilizers and related compounds. Journal of Applied Bacteriology. 1959;22(2):227-233.
Das AC.Utilization of insoluble phosphates by soil fungi. J. Indian Soc. Sci. 1963;11:203-207.
Nautiyal CS. An efficient microbiological growth medium for screening phosphate solubilizing microorganism. FEMS Microbiology Letter. 1999;170(1):265-270.
Kundu BS, Nehra K, Yadav R, Tomar M. Plant growth promoting abilities of phosphate solubilizers from the rhizosphere of Partheniumhysterophorus soil. Ind. J Microbiol. 2009;49(2):120–127.
Holt JG, Krieg NR, SneathPHA, Staley JT, Williams ST. Bergey’s manual of determinative bacteriology. 9th edn. Williams & Wilkins, Baltimore; 1994.
Smith AC, Hussey MA. Gram stain protocols. American Society for Microbiology. 2005;1:14.
Prinsen E, Chauvaux N, Schmidt J, John M, Wieneke U, De Greef J, Schell J, Van Onckelen H. Stimulation of indole‐3‐acetic acid production in Rhizobium by flavonoids. FEBS Letters. 1991;282(1):53-55.
Schwyn B, Neilands JB. Universal chemical assay for the detection and determination of siderophores. Analytical Biochemistry. 1987; 160(1):47-56.
Cappuccino JC, Sherman N, Microbiology. A Laboratory Manual, 3 Edn, Benjamin/ cummings Pub. Co. New York. 1992;125 - 179.
Sambrook J, Russell DW. Molecular cloning: A laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, USA; 2001.
Echeverrigaray S, Grazziotin G, Grazziotin F, Agostini G. Random amplified polymorphisms between two South American subspecies of rattlesnakes (Crotalus durissus collilineatus and Crotalus durissus terrificus). Brazilian Archives of Biology and Technology. 2001;44:313-317.
Jaccard P. Nouvelles researches surladistributionflorale. Bull. Soc. Vaud. Sci. Nat. 1908;44:223-270.
Sneath PHA, Sokal R. Numerical taxonomy. Freeman, San Francisco, CA, USA; 1973.
Prevost A, Wilkinson MJ. A new system of comparing PCR primers applied to ISSR fingerprinting of potato cultivars. Theor Appl Genet. 1999;98(1):107-12.
Villegas J, Fortin JA. Phosphorus solubilization and pH changes as a result of the interactions between soil bacteria and arbuscularmycorrhizal fungi on a medium containing NO3-as nitrogen source. Canadian Journal of Botany. 2002;80(5):571- 576.
Kundu BS, Nehra K, Yadav R, Tomar M. Biodiversity of phosphate solubilizing bacteria in rhizosphere of chickpea, mustard and wheat grown in different regions of Haryana. Indian Journal of Microbiology. 2009;49(2):120- 127.
Whipps JM, Lynch JM .The influence of the rhizosphere on crop productivity. Adv. Microbiol. Ecol. 1986;9:187-244.
Panhwar QA, Othman R, Rahman ZA, Meon S, Ismail MR. Isolation and characterization of phosphate-solubilizing bacteria from aerobic rice. African Journal of Biotechnology. 2012; 11(11):2711-2719.
ShahabS, Ahmed N. Effect of various parameters on the efficiency of zinc phosphate solubilization by indigenous bacterial isolates. African Journal of Biotechnology. 2008;7(10).
Rashid M, Khalil S, Ayub N, Alam S, Latif F. Organic acids production and phosphate solubilization by phosphate solubilizing microorganisms (PSM) under in vitro conditions. Pakistan Journal of Biological Sciences. 2004;7(2):187-196.
Naik PR, Raman G, Narayanan KB, Sakthivel N. Assessment of genetic and functional diversity of phosphate solubilizing fluorescent pseudomonads isolated from rhizospheric soil. BMC Microbiology. 2008;8(1):1-14.
Gopalakrishnan S, Humayun P, Kiran BK, Kannan IGK, Vidya MS, Deepthi K, Rupela O. Evaluation of bacteria isolated from rice rhizosphere for biological control of charcoal rot of sorghum caused by Macrophomina phaseolina (Tassi) Goid. World Journal of Microbiology and Biotechnology. 2011;27(6): 1313-1321.
Patten CL, Glick BR. Role of Pseudomonas putidaindoleacetic acid in development of the host plant root system. Applied and Environmental Microbiology. 2002;68(8): 3795-3801.
Wang Y, Brown HN, Crowley DE, Szaniszlo PJ. Evidence for direct utilization of a siderophore, ferrioxamine B, in axenically grown cucumber. Plant, Cell & Environment. 1993;16(5):579-585.
Woo SM, Lee M, Hong I, Poonguzhali S, Sa T. Isolation and characterization of phosphate solubilizing bacteria from Chinese cabbage. In 19th World Congress of Soil Science, Soil Solutions for a Changing World. 2010;1-6.
Naher UA, Radziah O, Shamsuddin ZH, Halimi MS, Mohd Razi I. Isolation of diazotrophs from different soils of Tanjong Karang Rice growing area in Malaysia. Int. J. Agric. Biol. 2009;11(5):547-552.
Franklin RB, Taylor DR, Mills AL. Characterization of microbial communities using randomly amplified polymorphic DNA (RAPD). J Microbiol Methods. 1999;35:225-235.
-
Abstract View: 220 times
PDF Download: 3 times